annotation	HsBam_polyA_moonKD_42h_A	Ov_polyA_whiteKD_XXX_A	HsBam_polyA_moonKD_42h_B	Ov_polyA_whiteKD_XXX_B	HsBam_polyA_whiteKD_00h_E	HsBam_polyA_piwiKD_42h_A	HsBam_polyA_whiteKD_42h_A	HsBam_polyA_piwiKD_42h_B	HsBam_polyA_piwiKD_68h_A	HsBam_polyA_whiteKD_42h_B	HsBam_polyA_piwiKD_00h_A	HsBam_polyA_moonKD_68h_A	HsBam_polyA_piwiKD_68h_B	HsBam_polyA_moonKD_00h_A	Ov_polyA_piwiKD_XXX_A	HsBam_polyA_piwiKD_00h_B	HsBam_polyA_moonKD_68h_B	HsBam_polyA_moonKD_00h_B	HsBam_polyA_whiteKD_68h_A	OV_polyA_piwiKD_XXX_B	HsBam_polyA_whiteKD_00h_A	HsBam_polyA_whiteKD_68h_B	HsBam_polyA_whiteKD_00h_B
adaptor_dimer	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
artifact_filtered	306923	9490	11009	11434	22533	238923	163622	40113	12264	15977	151011	159185	31541	194725	11392	24350	13142	16273	14295	18914	19536	7769	10110
length_filtered_short	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
length_filtered_long	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
N_filtered	120842	78148	72297	76015	75495	93245	101904	104281	51520	75268	89485	114851	73728	143865	60341	92516	77732	66788	66588	93491	131813	67545	71173
reads_after_filtering	35504525	23101099	21406322	22416900	22243757	27379335	30069827	30822805	15153474	22491486	26439719	33999212	21732439	42102486	17831817	27653751	22999455	19609883	19550115	27653237	38869929	19980195	21005240
reads_not_mapped	3620039	2243704	2498498	2657812	3089610	3250985	3178581	3503205	1501650	2558773	2874528	3383556	2665595	4449225	1888633	3517165	2758408	2497399	1881751	3461780	4351139	2047829	2800529
rRNA	171670	39267	61323	54535	40131	69981	129217	56509	20387	59194	26223	126328	27482	60099	90208	35056	112212	611710	78360	59877	62848	65398	29745
rRNA_AS	22	9	2	5	7	13	29	16	17	8	17	22	7	26	10	16	8	57	28	6	15	22	15
mito	246790	163673	116605	123050	137389	164648	211374	186018	134527	108226	232087	271896	115789	339959	112711	158159	125607	97254	144468	147589	285660	111003	118200
mito_AS	459530	387256	238417	274303	320095	318820	425966	425298	308008	211016	479108	466412	274264	682107	267118	405319	295027	233893	329806	380015	575129	259507	274368
tRNA	40	5	9	4	26	19	13	26	12	29	16	15	22	32	5	22	16	11	8	5	24	17	17
tRNA_AS	79	3	32	8	18	24	34	25	11	24	16	26	16	46	1	21	16	20	13	2	34	19	18
snRNA	2226	255	1556	163	2196	2109	1168	3286	654	1663	1567	1417	1435	1869	150	2988	1488	2328	1107	332	1425	1242	1605
snRNA_AS	0	0	2	0	2	1	6	1	1	2	2	0	1	1	0	2	0	3	0	0	3	2	1
snoRNA	4799	961	2948	1215	5093	4146	4252	5272	2437	3234	6430	5502	3524	7908	1023	5756	3733	4320	3175	1203	7742	3283	4392
snoRNA_AS	64	18	23	21	29	35	37	44	17	41	40	42	13	78	13	20	31	32	26	12	44	37	35
hpRNA	24359	9351	12882	8060	11026	27228	16432	30122	10034	11577	22738	24728	15464	23849	22538	26100	17073	11073	10174	33697	20055	9777	10356
hpRNA_AS	242	413	188	428	96	378	182	418	205	136	271	317	268	189	187	251	202	84	182	241	274	198	96
miRNA	1421	664	774	747	721	927	1128	1106	522	858	1015	1311	781	1465	569	985	874	648	828	813	1619	785	832
miRNA_AS	619	96	368	48	529	1394	585	1237	526	459	1771	477	861	992	37	1474	306	352	346	86	1345	309	565
intron	422201	64694	245474	79585	189211	305620	340503	341530	176553	261328	307956	356518	249039	430055	67290	330483	241895	186903	199865	86722	411043	226996	231051
intron_AS	41048	6807	22063	6716	18837	24619	32810	27640	12333	24894	22776	28059	16760	35442	7765	25402	17267	16208	15566	10086	33405	16913	21329
exon	29703024	20039894	17703998	19053330	17918549	22162588	25077178	24968902	12416774	18753650	21582738	28648271	17574024	35121843	14439839	22174420	18988678	15535071	16536961	22170658	32244305	16877588	17029590
exon_AS	83571	18947	41308	17295	40619	41617	61339	46362	21696	46554	45034	56586	28761	82470	14734	46801	35410	37479	34576	21398	72682	34673	48865
TE	370638	33472	241636	49033	288533	690818	308104	859390	383370	227061	546754	303728	539680	509926	825380	623771	194636	211865	138432	1153372	472967	150376	248859
TE_AS	57423	5345	31586	6032	20056	56958	33629	59616	27722	26498	56047	48823	40707	63997	14369	58345	31305	27458	21178	17167	46271	23433	24321
none	294719	86264	186629	84509	160983	256406	247259	306781	136017	196260	232584	275177	177945	290907	79236	241194	175262	135714	153264	108175	281899	150787	160450