gene_id	HsBam_totalRNAseq_whiteKD_00h_rep1	HsBam_totalRNAseq_whiteKD_00h_rep2	HsBam_totalRNAseq_piwiKD_00h_rep1	HsBam_totalRNAseq_piwiKD_00h_rep2	HsBam_totalRNAseq_rhiKD_00h_rep1	HsBam_totalRNAseq_rhiKD_00h_rep2
TE:1360_AS	43.5080216905632	57.5160688963045	48.9646644877612	52.45982130573	38.1984367086371	34.6622046222374
TE:17.6_AS	88.6005089661246	71.9927303922474	117.978512510475	82.1571031601875	79.0225808253027	54.2910215863966
TE:1731_AS	32.2877171497382	24.6716070301049	29.1586189885775	27.3684779056744	21.4606183550154	20.0829845701835
TE:297_AS	213.176871129727	198.534315933984	196.777065260041	153.582542657676	220.429952699702	187.036977765778
TE:3S18_AS	67.7321889464724	75.9047037712688	43.2560785222325	47.7389412728914	50.3765633959458	55.8412189107476
TE:412_AS	413.378934896034	376.489386199668	473.052183106892	383.016663311392	393.915106941828	413.087356743407
TE:AATAT_87_randomDistribution_AS	0	0	0	0	0	0
TE:accord_AS	40.6211828333854	35.6940130671068	53.0508649584891	37.1890180239954	20.9035256953909	18.6590796298614
TE:accord2_new_AS	14.0471349526018	10.5891905382459	10.0513319364192	9.27730693447456	7.11980950957092	6.93406970950171
TE:ATAAGn_CTTATn_randomDistribution_AS	0	0	0	0	0	0
TE:baggins_AS	35.7936462020602	37.7248366544772	91.5741981818597	82.8842505161823	25.4287569880407	28.8397115956253
TE:Bari1_AS	55.2810908985615	34.7906613995681	212.683660123958	214.443994213745	39.5953884994877	37.0437602327296
TE:Bari2_AS	0.184640953170042	0.444733898341083	0.171245374490642	0.646700197568133	0.509163605451927	0.383930895258234
TE:blood_AS	50.7988245069095	51.7986972163025	62.4803249154796	59.6571654081084	53.3041795034157	56.3026215361299
TE:BS_AS	20.2578571104126	19.1543213053999	25.9542760272951	24.5095219182283	18.2275399732006	17.6613523445748
TE:BS3_AS	0.678769180837418	1.08300861966559	0.803745935939179	0.93442180829073	0.349282387882712	0.350198263341631
TE:BS4_AS	0	0	0.157673612485917	0	0.110838052808418	0
TE:Burdock_AS	22.4253884145197	19.6393402753349	25.9691310854911	27.3904038121956	27.0832794181188	19.452342761949
TE:CACAAn_DMDNASMEM_randomDistribution_AS	0.871983019396499	0.776878083267223	0.159012859833273	0.389060408107927	0.329713638359794	0.183269684325772
TE:Circe_AS	39.9752833333485	36.1173779982745	52.6114795386096	50.4682228132337	19.1368734429804	16.4981599349147
TE:copia_AS	120.302450124044	86.0805065355612	117.717460707872	103.524135551682	90.9358530432061	93.4942504664641
TE:Copia1_AS	55.0433357830782	42.3850271022444	50.6191122150881	35.9441214669066	16.3052487638652	15.9379421118205
TE:Cr1a_AS	45.669274933825	55.2464374455865	57.2266473249015	59.408087243337	45.0004718572953	34.3315686713424
TE:diver_AS	55.4110159342276	47.3767314762665	47.6158817708728	48.2304080432457	46.7753692966416	47.4279264157679
TE:diver2_AS	33.3206243653279	38.3654066852692	34.143491966676	35.841619946711	33.216740243711	30.6582319184144
TE:dm359_randomDistribution_AS	38.8453314152664	7.79494937670276	66.7990374119051	60.6283057941992	3.61369863770066	5.84494909424496
TE:Dm88_AS	43.7368360660638	32.0577986565231	49.6886413866178	44.744305747627	18.7942174457507	21.5229828615735
TE:DMSAT6_randomDistribution_AS	0.1743966038793	0	0	0	0	0
TE:Doc_AS	287.920343514257	286.980137073243	294.752734940436	256.487392167956	285.298319106447	235.200952399182
TE:Doc3-element_AS	21.5967558881322	22.4705935695993	26.0615312850583	22.495776398116	16.533693047372	16.5657380497462
TE:Doc4-element_AS	1.3642365652988	1.33110456334253	1.28594285360513	1.32134381806786	0.700739859380463	0.856669810199062
TE:Dsim_ninja_AS	19.1926991838224	15.9295523428716	45.126186496405	41.3914753087795	15.4376936017686	15.4648375180294
TE:F-element_AS	212.534273212324	241.0806459894	287.403068037037	238.650938945153	182.120815342356	166.601893615291
TE:flea_AS	75.6704514727449	52.1591599420882	78.5844406479818	61.4823726592561	69.9346940372783	66.6938771482083
TE:frogger_AS	1.02026932238245	1.3568764557771	2.36121162910966	1.85523373784422	0.233776534661693	0.342964648814542
TE:Fw2_AS	1.70471854340135	1.33666991387486	2.26356543140507	1.05505595593488	0.80868775060882	0.687477049235104
TE:Fw3_AS	0.339803682706212	0.99507238470786	0.48191470297562	0.662989550905387	0.4644913391342	0.692107705267881
TE:G-element_AS	14.5509311439185	11.5450229886293	15.1625073518718	14.658846542897	2.434387700101	3.53875841712862
TE:G2_AS	13.9229668137211	8.77287655020753	11.5850301741649	13.0913788643444	6.81212574841472	4.92529084222357
TE:G3_AS	2.56336572480023	2.01185490492793	3.24944518926083	2.77524046580536	0.922735010783214	1.18969104265788
TE:G4_AS	9.15956294002896	12.4512872199199	12.1583441962929	8.6138193860168	7.38759465395611	5.22738127719439
TE:G5_AS	10.4353946448683	8.76280417181575	9.02538212116741	7.67344679934192	3.87790443814923	3.82992271609106
TE:G5A_AS	3.8860374689105	3.06433039586077	2.68805620818599	2.01961203785496	3.1727467978208	1.91172485704487
TE:G6_AS	35.2708461520242	28.3708302905568	32.539905549542	31.3410930183045	34.2297826885543	38.644396468481
TE:G7_AS	0.853061168992963	0.545981742592724	0.317208592947367	0.806378971190712	0.117059960431366	0.172940863981551
TE:GAGAAn_TTCTCn_randomDistribution_AS	0	0	0.954077158999637	0.907807618918495	0.219809092239863	0.183269684325772
TE:GATE_AS	38.4744524691157	37.7289458458115	42.6977079949945	44.9221601248435	17.0512710164409	20.3544343048044
TE:gtwin_AS	391.105669796419	318.172796838166	489.596159601607	456.094265148663	446.082102409227	517.128494159145
TE:gypsy_AS	64.7059095699563	39.1841924747052	81.1325372191327	76.1761963142158	51.0581631834222	54.6739321764768
TE:gypsy10_new_AS	217.031678974205	129.598950202543	315.289544867106	303.13665706058	307.736296180254	298.221666932444
TE:gypsy11_AS	0.873318081645025	1.25272627384693	3.75791125488334	2.29229142129977	0.884928468908431	0.839830970790008
TE:gypsy12_AS	23.6714811162564	19.5540516244972	18.4347654919438	15.1480944219445	7.72810861091745	7.58326040083459
TE:gypsy2_new_AS	155.223305510721	140.168890660033	207.852803250538	198.110927833365	153.206911833442	180.977558374816
TE:gypsy3_new_AS	62.3387147952932	47.7255616473462	70.1031081742048	60.4901195076897	62.4202827628471	71.0041497665261
TE:gypsy4_AS	161.53520849522	127.259506151522	207.922749611465	175.977289293678	171.486814587543	161.112582085598
TE:gypsy5_AS	81.0518138402803	66.1873492720056	86.1440215979178	76.8183609911816	89.1581669390963	87.8120697202068
TE:gypsy6_new_AS	72.6923927340329	70.7788179207846	81.2730973816343	85.7754453146612	47.3862810673744	57.875662398556
TE:gypsy7_new_AS	6.3714933394341	4.82903371239721	7.31215450903419	6.04207287939036	2.06350567457659	2.88835564960114
TE:gypsy8_AS	1.87865588119586	2.13393003156339	2.06620878499082	2.68538319849315	0.23679731101833	0.34921954677579
TE:gypsy9_new_AS	5.36562759671482	2.80629529915177	6.19854888551549	3.27305740918302	1.13718574085912	0.681527709327886
TE:Helena_AS	1.6929125795645	0.956791358477881	2.22182025523736	1.74217159438367	1.07251089075094	1.52280391814886
TE:Helitron_AS	0.523399064908863	0.224867532736811	0.324978122399663	0.260267877139081	0.115462452341572	0.167866194732308
TE:HeT-A_AS	27.0286362566887	20.428316062418	28.7702182587555	20.5992113317794	19.0518267930259	21.5960786701208
TE:HMS-Beagle_AS	72.3968262843533	60.8034620744192	54.5366966214493	53.2509015146222	38.1440817969453	36.3264543979307
TE:HMS-Beagle2_AS	248.70021965032	191.316193513146	320.955595850496	271.495586590039	286.069398409686	293.009028387912
TE:hobo_AS	47.2880168892757	53.8414970385813	62.8498114053273	69.9431129945781	76.6053976457333	66.6224069223527
TE:hopper_AS	6.05885007544581	8.07343801872067	7.29858603064201	8.17496273984132	8.1662330761465	5.50326279537917
TE:hopper2_AS	1.57830793504222	1.08818561275821	3.62087410520605	1.8573673256795	1.46198963626241	1.88859943806157
TE:I-element_new_AS	17.8115469402049	21.0670164532991	18.4739940653888	13.8992803434384	23.8177540369586	15.9569196926163
TE:Idefix_AS	47.5522850623285	45.6379986397199	65.9749068891913	52.3500538149664	48.4197376344873	45.4978712322575
TE:INE-1_AS	0	0	0	0	0	0
TE:invader1_AS	28.6504008736511	21.2010701306207	23.7697985882091	24.4088626314895	9.34083480849497	10.592916710654
TE:invader2_AS	42.4099940767012	32.2676016178893	60.908462395083	48.2448669275201	50.8561574625223	29.9521906145274
TE:invader3_AS	46.2386119201164	26.9007744069507	34.4630853415173	30.6823928924052	12.6751014416909	11.1018886320117
TE:invader4_AS	20.2624898172279	24.0915873090915	26.0018994093996	27.8119202437703	18.3718404344295	14.5588253419838
TE:invader5_AS	0.854312434480196	0.448928702667172	0.96188087360803	0.529005446023233	0.816013291568767	0.339252987505674
TE:invader6_AS	30.2513118238086	22.9875717437558	27.7816461881933	22.5737107141977	22.0686385584762	19.9344721718096
TE:Ivk_AS	14.888445067396	9.21076416428997	16.1622036389257	13.7701453882536	6.47041124936231	6.93504863930686
TE:jockey_AS	82.5960877960818	82.5315717111704	93.905826430961	100.944743448203	98.7431731581797	106.624985523173
TE:jockey2_AS	2.72030552438725	2.88074959403998	1.76151241193963	1.32701628915496	1.39924720471291	1.72232391946402
TE:Juan_AS	25.0942242691738	17.0211610716316	17.0714453403202	15.3672681138172	16.8597510689993	16.4562009209133
TE:looper1_AS	5.03180868738274	3.21357802947024	2.13280957447747	2.35551075829496	0.914240948086093	0.822712770234374
TE:mariner2_AS	2.23012090419035	2.22810752931972	3.31472730153266	3.74728805498539	2.56519904603986	1.87863627939525
TE:Max-element_AS	50.2629551232667	61.0580174969592	137.641433659092	113.535357050045	85.7938461663231	72.6600849592901
TE:McClintock_AS	37.9982231763122	30.8329811888525	43.036433867557	32.9982902460441	28.1494593517884	19.9387617973413
TE:mdg1_AS	333.313680705571	285.093851992889	401.297676151915	316.277541285348	326.896626290397	333.798115226063
TE:mdg3_AS	90.0979776700136	75.7178639671877	93.6880044461354	71.1905342051264	85.8169798632822	83.3399775293986
TE:micropia_AS	33.4965896404344	25.7819430446077	26.1058317412089	30.3196729414788	8.68166713835023	10.6135300853235
TE:NOF_AS	52.5607080343612	65.6008770775412	55.2120367497236	50.0763572940192	73.4185891068982	52.5441739187926
TE:NTS_DM_randomDistribution_AS	0	0	0	0.259373605405285	0	0
TE:opus_AS	254.97745244146	238.843312139828	359.20347448807	380.050228808396	193.759258702147	200.877655960785
TE:Osvaldo_AS	2.20586652374177	1.81047707458032	2.07811562155795	1.3337146817326	0.817633432593113	0.535942939997028
TE:P-element_AS	0.867516518096361	0.907922024939859	0.818344854846217	0.782825532676651	0.913876486303664	1.67372175280485
TE:Pifo_Dya_repbase_AS	52.285269491101	39.4050189501224	54.150283911227	40.2309203655539	52.5258145508167	49.3241349032234
TE:pogo_AS	25.7148298487232	31.3844048369744	23.6763187650008	25.0866042621931	24.4628620013839	26.2738611166488
TE:Quasimodo_AS	120.49379356288	116.107538035374	174.24520023162	131.893370261194	125.211372216405	137.888103104005
TE:R1-2_AS	0.507060445113068	0.323593334220304	0.630905398187037	0.537399213019246	0.709065662071713	0.352179350141967
TE:R1A1-element_AS	66.1556236682038	59.4367514316388	117.425310012301	123.855943945801	35.0212441192132	41.3408910807163
TE:R2-element_AS	12.0517547687221	6.19909959793041	18.2828388172805	17.4193547463141	3.62977151913781	6.45997899253822
TE:Repbase_Bica_AS	40.4587980829656	38.9802083502869	51.1535745684207	45.7290948970342	18.5534898426829	18.8111366901324
TE:Repbase_Chimpo_AS	19.7529844262675	22.4040372874182	20.3270347761583	20.3218524001611	8.14648923597255	8.21715842924286
TE:Repbase_Chouto_AS	22.6294736592595	18.7115102986226	20.7191509422177	17.458049869579	8.01653676585862	15.9890234993396
TE:Repbase_DNAREP1_AS	3.05452696778271	2.02406492102171	0.968686436758334	1.86306708590484	2.27265136458697	2.13125537092244
TE:Repbase_FB4_AS	103.913863966967	115.084934241836	107.098571134379	138.159331004606	132.415247095071	131.260380536648
TE:Repbase_Rt1a_AS	55.0812485037786	57.9955548483054	71.1069004266849	62.2569197486778	46.9015933837786	54.3205797927432
TE:Repbase_Rt1b_AS	98.3605193899736	88.2292055436714	124.163854089385	123.569670941613	70.6026976088533	81.0028948070831
TE:Repbase_Transib1_AS	7.17648893174412	7.75914171654606	8.71126229139352	6.16852145319962	6.23943522264119	5.78699799425538
TE:roo_AS	897.040672960107	906.275066655511	1119.21983387181	946.300642738972	977.516027819961	1058.3285058499
TE:rooA_AS	45.8643272784797	40.987429405485	32.5700454840165	30.7868984719436	28.460730711912	27.3740001944102
TE:rover_AS	89.7235621033792	79.0523571196242	118.685908600183	79.4686741685346	109.658039554181	72.8953352073317
TE:RSP_randomDistribution_AS	0.307112419431447	0.796522000515552	0.205921653484088	0	0.119466241632365	0.366539368651544
TE:Rt1c_AS	2.21782688173802	1.30248092181471	1.90761624567081	1.18888911053922	0.458282468124378	0.72182329114421
TE:S-element_AS	3.47489024059908	3.48570789925003	4.71698939203339	4.77565919149487	3.69947228563333	3.77875888080208
TE:S2_AS	1.04881000506696	0.801477218294572	0.327666599916249	0.774626853300318	0.227029417102769	0.167298807334398
TE:SAR_DM_randomDistribution_AS	0.880336634396074	6.24394626414323	4.34961065847089	4.93364788518294	2.94166830370229	3.31209257526877
TE:SAR2_DM_randomDistribution_AS	1.44440184089917	0.353614956784333	1.39183469205747	1.14518240944917	1.73758844715816	1.41418262948299
TE:Satellite_260bp_1pt688_randomDistribution_AS	1.28833914439271	1.03066320367652	0.66721425816635	0.341398052154803	0.225086298695455	0.155630004961925
TE:Satellite_353bp_1pt688_randomDistribution_AS	3.86066213907859	1.51257825019197	3.11914697793922	4.24976697745208	1.01507007110504	1.78125684350383
TE:Satellite_356bp_1pt688_randomDistribution_AS	1.60316925666926	3.95292075112126	3.95895041652727	2.56036393208127	0.551488423692382	0.155022883809151
TE:Satellite_LRsp_randomDistribution_AS	6.2782777396548	2.21965166647778	2.54420575733237	4.02029088378191	0.549522730599657	1.09961810595463
TE:Satellite_RRsp_randomDistribution_AS	14.6909955141883	7.52717174877613	8.0627470578461	8.55932897837439	1.63900649628654	3.11558463353813
TE:small_kipf_region_randomDistribution_AS	1.19925381407325	1.79941849808126	3.36152127325563	3.44350611480563	5.83132792939345	5.2314497786777
TE:some_gene_Ebx_randomDistribution_AS	198.5861893905	240.253702444295	162.875405968757	193.571979055145	214.257215814651	192.927816145825
TE:some_heterochromatin_region_randomDistribution_AS	29.8818810794649	48.0938087681022	26.4019617950051	33.1019542716926	41.1090836744745	31.1399683432553
TE:springer_AS	112.596976387592	90.6421617455218	144.624675375555	137.074919323006	110.647880928007	118.418341961167
TE:Stalker_AS	253.593250376262	232.593947767784	266.394278994992	244.905880643969	196.093525676698	242.353885944598
TE:Stalker2_AS	113.746946296793	90.8769566680335	131.925497454656	106.024486946779	107.442664064235	124.843698352823
TE:Tabor_AS	195.571784175594	169.884779812292	239.797960925484	193.513982963571	210.683000631339	205.973098529401
TE:TAHRE_AS	37.1859543511567	31.3069210234041	26.0617161252296	22.4425212210834	22.1893943804356	19.9863859341126
TE:TART-A_AS	310.040363292125	313.631240807862	593.454099201252	552.516156258348	414.217091182129	498.989105850921
TE:TAS_2L_randomDistribution_AS	203.528030809445	243.210056604554	166.971163708542	73.4047558218758	150.172534108759	114.456868029736
TE:TAS_2R_randomDistribution_AS	4.4998129550906	6.25575161250379	0.787183749593006	1.21385946276671	1.85444076894113	1.1706228522097
TE:TAS_3L_randomDistribution_AS	1.9215150079761	5.83742520549371	0.762225229155294	0.880609658080787	2.44433481477056	1.69826812035843
TE:TAS_X_randomDistribution_AS	19.4459013241255	19.6007419540907	34.8251104519991	30.5506179236133	26.2831268527169	25.7632022254092
TE:Tc1_AS	9.98452610858801	9.39399907968113	7.45024057985324	9.39177535438413	12.3405508777558	7.86907793717281
TE:Tc1-2_AS	1.57650274356589	2.29117672702937	1.49990025669752	1.93547479795228	1.23973045172682	0.330617348619887
TE:Tc3_AS	0.691764955277682	0	0	0.127563249211676	0.225348836989919	0
TE:Tirant_AS	58.4127702691933	55.7023452764104	98.1474295928573	64.4021851225277	94.8908522709459	77.581809556234
TE:tirantS_Dsi_Lerat_AS	0	0.110585476101892	0.159583867503141	0	0	0
TE:transib2_AS	11.8132924588	14.4525677609156	9.26543247809871	8.68649698700737	10.0592614496811	8.07719881731923
TE:transib3_AS	1.57066035762796	2.97877248550509	2.98865365320954	2.58662539871274	1.56820815853635	2.50745053772961
TE:transib4_AS	5.24339344246256	4.73169132551288	3.48908454221627	2.83593780910684	2.66344464724704	1.67689078922001
TE:Transib5_AS	2.6481780410612	2.91546835834001	2.35679734031669	2.69424021557343	1.43896041683284	1.63337615208043
TE:Transpac_AS	43.8539697713284	41.3605893425325	172.37408790531	134.679508034291	97.4192036390374	54.2083608279083
TE:X-element_AS	52.3462022054848	46.6128359492955	59.6775684569887	58.527620706367	31.4490974859001	37.1076965741391
TE:XDMR_randomDistribution_AS	0	0.595853950898331	0.722737614904316	0.509540682825768	0.429167809608931	0.156643595329961
TE:ZAM_AS	12.4211422404839	14.6237176352585	20.4272647317772	10.720130306481	15.5406207074721	12.2736100245221