TE sRNAseq_Ovaries_MTD_PiwiKD_rep2_283083_sRBC_CTGAT sRNAseq_HsBam_ControlKD_0hAHS_rep3_283082_sRBC_GTCAG sRNAseq_HsBam_PiwiKD_0hAHS_rep2_283081_sRBC_GGTAT sRNAseq_HsBam_ControlKD_0hAHS_rep1_283080_sRBC_GTCAG sRNAseq_HsBam_ControlKD_0hAHS_rep2_283081_sRBC_CAGTG sRNAseq_HsBam_PiwiKD_0hAHS_rep3_283082_sRBC_CGTTC sRNAseq_HsBam_PiwiKD_0hAHS_rep1_283080_sRBC_CGTTC sRNAseq_Ovaries_MTD_ControlKD_rep1_283083_sRBC_ATGGA 1360_AS 27867.4 117578 28554.2 85803 87037.9 27255.7 19858.3 28506.3 1731_AS 7710.91 121517 20403.2 83420.1 82555.5 16909.1 13354.9 10549.8 17.6_AS 23070 350183 150403 244745 257958 149195 102004 33593.7 297_AS 134812 305681 130773 198142 213599 143528 90861.3 136964 3S18_AS 14949.6 130218 6224.17 91700.3 91134.5 6065.61 4099.8 14709.7 412_AS 98570.9 882924 654165 620211 624086 690306 442591 114904 AATAT_87_randomDistribution_AS 1223.44 0 0 0 0 0 0 1579.52 accord_AS 4906.35 159252 30480.8 112116 114905 28919.8 20997.3 6709.03 accord2_new_AS 1046.06 41288.5 8702.19 28253 29989.1 8715.49 6162.48 1390.46 ATAAGn_CTTATn_randomDistribution_AS 0 0 0 0 0 0 0 0 baggins_AS 16968.3 136152 35576.3 98964.7 100289 33459 23028.4 20746.1 Bari1_AS 30740 290256 30673.2 207245 209235 25979.7 20189.6 30757.9 Bari2_AS 5.80655 1204.54 40.9574 624.125 635.036 38.7191 72.256 21.2453 blood_AS 42732.6 219742 133707 155010 158613 138768 91777.8 44585.8 BS_AS 27513 121370 29604.3 84913 84517 27141.5 18905.6 37596.3 BS3_AS 2709.95 29952.8 3808.59 21889.5 22386.6 3205.7 2558.36 3268.46 BS4_AS 23.5118 106.806 0 78.2373 98.8714 0 0 11.1808 Burdock_AS 24445.1 54157.8 12949.2 36781.7 40354.2 11888.8 8164.18 25718.8 CACAAn_DMDNASMEM_randomDistribution_AS 0 0 0 4737.26 0 0 0 0 Circe_AS 16708.9 82959.3 16780.1 56874.6 55843.7 15606 11194.1 21601.7 copia_AS 22231.7 200619 16804.6 144297 140701 14827.3 11945.4 17504.5 Copia1_AS 29079.2 279202 53828.5 193942 195918 45817.3 35672.3 27207.5 Cr1a_AS 23183.5 89661.5 23765.5 63150.5 64024.9 21189.6 15526.9 25887.3 diver_AS 9997.93 156444 12391.3 112134 111611 11871.9 8814.5 9835.58 diver2_AS 3069.33 31821.8 7808.33 21580.4 21833.8 7171.27 4834.03 3499.86 dm359_randomDistribution_AS 37432.9 236364 82583.7 126580 127491 89822.8 50966.2 55092.4 Dm88_AS 12506.3 220579 46584.5 150095 150093 42343.9 29362.4 11915.5 DMSAT6_randomDistribution_AS 0 796.978 0 427.021 420.78 0 0 43.2744 Doc_AS 119563 576867 194278 407993 407076 196187 126951 127946 Doc3-element_AS 15378.4 127426 39389 93186.5 97358 34772.1 26155.4 19135.9 Doc4-element_AS 366.216 11657.8 1631.52 8110.2 8565.99 1690.47 1190.89 429.912 Dsim_ninja_AS 5542.25 78708.3 27492.6 56278.7 53771.7 22879 16956.3 6873.18 F-element_AS 185915 778056 223412 547266 558388 217096 155954 251823 flea_AS 21979.9 265504 21642.8 187256 184063 19415.9 14442.7 13609 frogger_AS 33.3818 1735.71 88.6892 1009.61 1063.37 107.062 56.7537 24.5434 Fw2_AS 376.344 4978.81 1071.05 3794.96 3777.85 980.746 693.787 341.559 Fw3_AS 255.54 8756.19 785.192 6045.17 6354.15 926.385 624.768 298.779 G2_AS 43863.1 266773 58384.2 188691 181569 52294 40940.4 62675.2 G3_AS 168.809 3985.51 539.325 3272.73 3391.29 427.215 322.774 218.618 G4_AS 6774.89 70205.7 12295.3 49867.5 52966.9 11553 8278.2 8127.76 G5_AS 1163.2 78054.5 13505.3 55204.8 54469.4 12185.4 9365.92 1238.72 G5A_AS 944.866 15284.7 1687.68 10786.6 10663.9 2054.1 1267.26 1093.12 G6_AS 52552.5 669376 174781 470233 457158 168272 121532 65923.3 G7_AS 256.436 5476.33 640.759 3141.97 3995.77 445.972 263.919 334.908 GAGAAn_TTCTCn_randomDistribution_AS 0 0 0 0 0 0 0 0 GATE_AS 23852.6 96061.6 20679.7 68198.2 65123.9 18480.5 13999.6 30144.6 G-element_AS 22108.4 301207 80061.2 217445 205071 70858.8 53952.1 31306.6 gtwin_AS 27864.9 450235 309610 315066 319004 323765 211734 33837.1 gypsy_AS 8577.25 119894 40894.1 84473.6 84524 39971.9 27946.6 10414.2 gypsy10_new_AS 20148.8 382887 289814 263794 266599 313787 198654 24771.6 gypsy11_AS 241.193 2407.95 917.314 1646.85 1656.63 893.317 594.937 300.902 gypsy12_AS 8597.31 36040 4952.26 24218.1 24470.6 4193.22 3049.66 10282.5 gypsy2_new_AS 13480.3 200823 98058.6 139698 142008 100712 65493.5 15421.6 gypsy3_new_AS 7505.14 118346 77287.7 82949.7 82759.8 81633.1 53433.8 8455.94 gypsy4_AS 20950.8 335017 158703 234035 234289 165345 108828 23930.6 gypsy5_AS 22553 134677 112319 92967.8 94855.9 118134 77724.1 23761.1 gypsy6_new_AS 9194.39 174672 55211.5 121478 118184 53362.4 37022.6 10465.3 gypsy7_new_AS 1518.34 30029.1 6199.6 21931.1 21835.9 6457.4 4325.64 1421.69 gypsy8_AS 1979.13 13281.6 3113.17 9131.54 8991.93 2825.26 2247.48 2006.99 gypsy9_new_AS 208.848 9015.42 1195.67 5858.38 6510.69 1072.11 747.877 203.057 Helena_AS 4415.08 72185.9 15431 49996.6 52655.3 15243.5 10990.5 4360.2 Helitron_AS 48.1871 3370 175.199 1730.61 1896.87 315.8 426.944 39.5156 HeT-A_AS 30426.4 205321 13817.5 149383 145055 10992.4 10109.2 47910.4 HMS-Beagle_AS 12641.3 244118 24764.6 171107 172685 22169.6 16905.1 10859.1 HMS-Beagle2_AS 36766.7 521668 345889 361497 363611 359862 237217 47063.3 hobo_AS 961.216 29535.7 4274.8 19602.8 20191 4145.36 2661.61 1201.76 hopper_AS 2220.4 24366.3 4726.47 15971.7 16590.6 4301.36 3325.03 1937.19 hopper2_AS 941.599 39972 4507.19 26929.5 27870.6 3665.9 2958.71 844.273 Idefix_AS 12853.3 228484 131246 161241 166642 135837 91596.4 13686.8 I-element_new_AS 19296.9 144766 48230.4 106856 110784 47737.2 34712.6 19973.9 INE-1_AS 169.908 801.216 0 287.761 158.066 37.1087 0 209.838 invader1_AS 10415.1 115486 19882.4 79790.6 78207.5 17852.2 12926.4 13106.2 invader2_AS 13465.1 172420 37075.5 122542 122755 29589.2 23956.5 13593.5 invader3_AS 3866.3 238227 45710.1 169123 168340 39191.9 31756.7 3249.08 invader4_AS 5405.62 94540.2 12047 68733.6 67732.6 10656.5 7651.16 5919.68 invader5_AS 39.3022 315.588 26.4797 166.973 217.172 12.9642 5.11634 26.2502 invader6_AS 43751 94135.5 15954.3 64514.9 63340.7 13997 10421 50070 Ivk_AS 11449.1 161034 37991.6 113571 112207 35696.4 26456.8 11681 jockey_AS 25955.7 115332 16476.6 80829 82159.2 15369.3 10321.8 23253.6 jockey2_AS 936.064 15832.8 5725.12 11496 11011.8 5612.98 4282.55 1094.36 Juan_AS 23308 113649 10322.7 79187.8 80729.8 10837.3 7342.77 25925.1 looper1_AS 4111.34 38818.8 3964.93 26611.8 25700.8 3011.16 2207.82 5223.95 mariner2_AS 116.413 1692.95 166.184 1051.87 1144.79 215.97 190.196 129.215 Max-element_AS 42043.7 125805 23652 89619.7 86974.7 21026.7 15800.5 51528.5 McClintock_AS 6691.35 142070 39796.2 101545 104421 39608.4 27027.1 6825.51 mdg1_AS 71756.9 1.04023e+06 809121 734970 757362 826969 540971 82058.6 mdg3_AS 28412.3 266605 2952.94 188938 193400 2790.87 2095.8 26610.7 micropia_AS 8045.25 133658 16471.1 93413.3 93410.5 13777.4 10890.8 10049.9 NOF_AS 582.966 1063.04 142.098 845.593 826.479 87.8805 71.4761 717.195 NTS_DM_randomDistribution_AS 45577.7 29129.1 7829.15 19200.2 21194.8 7036.2 4631.03 66784.8 opus_AS 40750.1 265383 56503.4 186039 185006 49838.8 36013.7 39222.9 Osvaldo_AS 1208.18 54154.4 11362.6 36369.3 36485.7 9740.89 6384.06 1629.44 P-element_AS 43.2028 119.488 4.95342 102.324 68.3794 0 0 53.6331 Pifo_Dya_repbase_AS 5558.59 52336.2 37898.7 36856.6 37846.4 40787.5 27273 6231.12 pogo_AS 20720.5 192883 6969.75 137601 142187 6563.77 4944.27 24047 Quasimodo_AS 20926.3 303890 126579 217543 225927 132855 88164.4 21666.9 R1-2_AS 99.9326 1353.31 170.809 937.373 931.996 99.0963 71.9228 127.001 R1A1-element_AS 91637.9 262548 68284.8 187983 181434 56678.8 42242.6 146709 R2-element_AS 1730.63 87410.3 18803.1 60118.3 59394.2 17169.2 11585 2552.11 Repbase_Bica_AS 7501.75 152236 26702.7 106337 107828 23092.3 16462.3 8255.65 Repbase_Chimpo_AS 9732.88 143794 32796.4 100430 102335 29168.4 21163 15212 Repbase_Chouto_AS 2159.71 63252.1 10879.6 44520 43509.1 9703.17 6623.4 2052.16 Repbase_DNAREP1_AS 10578.4 24577.6 5012.57 19886.3 18831.6 3795.06 2906.72 9082.91 Repbase_FB4_AS 1759.4 4514.58 1830.39 3078.72 3032.7 1808.33 1370.04 1654.16 Repbase_Rt1a_AS 86492.4 207210 43749.1 150990 147603 37570.8 27761.7 119841 Repbase_Rt1b_AS 123199 333091 98566.1 240588 236471 85404.9 64121.4 170073 Repbase_Transib1_AS 826.929 18508.6 1086.57 12615.3 12821.5 1275.76 847.729 835.791 roo_AS 167322 321398 111428 223696 230721 110945 72520.9 182309 rooA_AS 38941.4 89588.7 16612.9 64020.9 64060.9 15454.6 11227.4 46113.8 rover_AS 23997.6 271748 138215 190895 196780 151957 99516.5 32660.2 RSP_randomDistribution_AS 613353 3.20385e+06 912275 2.43032e+06 2.16326e+06 1.15919e+06 780014 347550 Rt1c_AS 1347.35 6914.8 577.006 4682.29 4668.71 468.457 377.474 1635.19 S2_AS 309.53 2408.86 199.794 1884.04 1465.21 202.272 75.363 271.109 SAR2_DM_randomDistribution_AS 921.661 53690.2 11228.3 38232.1 42367.7 9699.9 6406.91 937.819 SAR_DM_randomDistribution_AS 81.3836 1659 102.195 1034.46 942.395 130.951 46.5457 93.4701 Satellite_260bp_1pt688_randomDistribution_AS 168592 311338 33194.2 269445 266423 28920.2 21949.7 127626 Satellite_353bp_1pt688_randomDistribution_AS 12800 170568 55590.7 119430 125756 48011.4 35178.5 10942 Satellite_356bp_1pt688_randomDistribution_AS 200299 577701 179092 404978 439831 162583 110538 197729 Satellite_LRsp_randomDistribution_AS 687259 1.03263e+07 1.74364e+06 7.81482e+06 6.45681e+06 1.87306e+06 1.49479e+06 552087 Satellite_RRsp_randomDistribution_AS 816353 1.24921e+07 2.25512e+06 1.00303e+07 9.99439e+06 1.7929e+06 1.46904e+06 808611 S-element_AS 15038.9 46767.7 5763.85 32649.8 30921.9 5002.32 4156.34 19186.6 small_kipf_region_randomDistribution_AS 19.9133 0 0 0 0 0 0 19.3717 some_gene_Ebx_randomDistribution_AS 69.1269 504.708 62.148 266.553 309.076 58.832 31.8902 190.956 some_heterochromatin_region_randomDistribution_AS 853.607 6120.97 1129.1 4201.06 4070.01 1088.91 658.712 897.865 springer_AS 21139.7 161565 42125.9 114370 111246 40766.8 29522.4 22720.3 Stalker_AS 210960 646318 355325 438089 454791 373572 241842 256728 Stalker2_AS 21199.6 343219 265497 237601 242739 278261 182690 24001.2 Tabor_AS 33457.4 516846 406404 352406 363700 444011 275139 36960.3 TAHRE_AS 6791.59 173605 6661.68 126039 121106 5146.77 4642.78 8978.46 TART-A_AS 25459.8 133038 11457.5 93126.7 88057 12436.2 7423.82 44383.4 TAS_2L_randomDistribution_AS 132834 398535 65411.9 248875 321768 61273.2 40010.2 169824 TAS_2R_randomDistribution_AS 29914.5 82071.2 3753.13 56497.2 54850.1 3541.92 2924.98 45878.9 TAS_3L_randomDistribution_AS 151852 130915 10042.2 91865 91095 10676.9 7190.03 44572.5 TAS_X_randomDistribution_AS 1321.33 10745.6 584.413 7922.03 7435.94 581.774 443.297 1393.83 Tc1_AS 231.295 12976.8 691.186 7458.28 9151.46 800.393 443.028 238.429 Tc1-2_AS 5719.93 26621.8 4379.26 19343.9 18816.2 3703.52 2933 7427.54 Tc3_AS 47.6424 150.459 17.9773 85.0589 101.797 17.9074 0 62.3406 Tirant_AS 144.557 569.997 210.836 340.105 388.919 209.885 153.358 72.3265 tirantS_Dsi_Lerat_AS 6.04451 45.7731 10.8493 31.1686 27.3546 12.6816 6.23733 9.49937 transib2_AS 10967.1 128679 16222.4 91973.4 90811.7 13570.3 10709.8 10427.4 transib3_AS 89.4579 4725.57 194.803 2854.58 3206.31 172.763 164.938 91.7832 transib4_AS 61.3214 348.517 168.584 258.893 314.437 149.249 123.014 47.3682 Transib5_AS 257.899 20197.8 4338.81 14827 14991.8 3823.9 3114.61 260.306 Transpac_AS 8690.37 77487.4 19989.1 54617.1 58314.8 18686.6 13241.1 8335.1 XDMR_randomDistribution_AS 4133.26 5824.48 652.774 3734.33 3878.76 725.305 707.588 3144.69 X-element_AS 54790.5 209884 45393.3 149118 144286 39649.4 29718.9 70539.4 ZAM_AS 3699.5 53344.1 35741.7 36972.7 39575.4 39760.6 26611.7 4137.64