TE sRNAseq_Ovaries_MTD_PiwiKD_rep2_283083_sRBC_CTGAT sRNAseq_HsBam_ControlKD_0hAHS_rep3_283082_sRBC_GTCAG sRNAseq_HsBam_PiwiKD_0hAHS_rep2_283081_sRBC_GGTAT sRNAseq_HsBam_ControlKD_0hAHS_rep1_283080_sRBC_GTCAG sRNAseq_HsBam_ControlKD_0hAHS_rep2_283081_sRBC_CAGTG sRNAseq_HsBam_PiwiKD_0hAHS_rep3_283082_sRBC_CGTTC sRNAseq_HsBam_PiwiKD_0hAHS_rep1_283080_sRBC_CGTTC sRNAseq_Ovaries_MTD_ControlKD_rep1_283083_sRBC_ATGGA 1360 8.59984e+07 3.55066e+07 7.49278e+06 2.64042e+07 4.47014e+07 2.9567e+06 1.69473e+06 5.97032e+07 1731 82619.8 6.97927e+06 1.51887e+06 4.40295e+06 9.45032e+06 652814 337826 84844.3 17.6 243291 1.84835e+06 676399 951411 1.9942e+06 275133 149863 255851 297 392203 486182 296211 295788 452518 136157 66649.2 158108 3S18 2.09432e+06 2.86115e+06 1.6621e+06 1.74858e+06 3.26288e+06 936168 392055 975622 412 526297 480460 78190.5 271021 518022 43019.6 18672.9 445703 AATAT_87_randomDistribution 9667.39 288.624 0 0 114.779 0 280.508 14173.3 accord 41223 1.27341e+06 1.12005e+06 732732 1.31646e+06 506786 261018 41902.6 accord2_new 7656.77 356830 73179.4 198793 346790 41701.5 22471.5 6219.19 ATAAGn_CTTATn_randomDistribution 1275.35 19885.3 5562.43 91084.6 40786.3 2830.01 0 832.836 baggins 402253 3.1014e+06 1.61034e+06 1.69589e+06 3.67965e+06 872277 312890 354223 Bari1 1.49761e+06 5.85173e+06 587472 4.00809e+06 8.63363e+06 301274 161012 1.04863e+06 Bari2 192.025 9220.76 196.732 7134.83 10010 302.665 88.5815 191.502 blood 677226 512620 278960 306046 531223 145327 67970.3 359138 BS 1.3671e+06 2.25151e+06 701050 1.31798e+06 2.49035e+06 302404 159901 1.03542e+06 BS3 66774 1.2157e+06 143535 719865 1.28123e+06 80373.9 41614.2 45641 BS4 110.337 1607.72 21.3551 1068.08 1031.49 0 0 97.4105 Burdock 511942 293471 112333 166410 325518 58808.7 26139.1 236944 CACAAn_DMDNASMEM_randomDistribution 7214.61 1.21026e+06 70994.1 688912 749463 42059.8 21991.8 27081.5 Circe 1.25863e+07 1.51616e+07 6.20291e+06 1.00093e+07 2.19166e+07 2.42391e+06 1.42171e+06 1.04416e+07 copia 1.55974e+06 1.21431e+07 1.62058e+06 7.95423e+06 1.48952e+07 865031 438505 919930 Copia1 696020 2.77136e+06 3.96237e+06 1.58211e+06 3.17526e+06 1.88207e+06 757016 389523 Cr1a 3.51173e+06 5.4699e+06 2.09622e+06 3.99469e+06 7.12108e+06 871772 475941 2.3493e+06 diver 611775 2.66656e+06 7.89732e+06 1.49011e+06 2.8706e+06 3.0773e+06 1.36175e+06 422145 diver2 1.36761e+06 8.92296e+06 3.90095e+06 6.22281e+06 1.39145e+07 1.42402e+06 809242 914461 dm359_randomDistribution 0 0 0 0 0 0 0 0 Dm88 786786 8.63222e+06 1.93171e+06 6.06864e+06 9.67959e+06 797288 583949 254663 DMSAT6_randomDistribution 3108.07 82706 9661.06 69723.4 60761.7 4282.38 4177.78 4168.92 Doc 1.06197e+07 5.66825e+06 3.48936e+06 3.40934e+06 5.87576e+06 1.40207e+06 778165 5.32104e+06 Doc3-element 282407 884177 548039 488675 919860 260950 110284 210529 Doc4-element 2287.33 115613 13612.4 70846.7 113696 10292.2 6652.59 2272.5 Dsim_ninja 1.10117e+06 1.24109e+07 7.16377e+06 8.11751e+06 1.73087e+07 2.8928e+06 1.4409e+06 1.08729e+06 F-element 7.54754e+06 1.02008e+07 4.52125e+06 5.80151e+06 1.17363e+07 2.0187e+06 967798 5.12394e+06 flea 351176 2.46031e+06 5.71032e+06 1.4662e+06 2.91641e+06 2.47004e+06 1.24388e+06 60845.3 frogger 441.484 13598.2 959.751 8666.53 11747.3 894.903 582.029 631.68 Fw2 1230.86 92501.2 23046.9 45503.9 94611.8 7325.27 6924.25 1025.83 Fw3 1548.05 56472.2 3693.84 43398.4 59139.7 1999.87 1695.23 1874.54 G2 841423 1.14413e+07 4.19163e+06 6.2206e+06 1.23005e+07 1.62942e+06 730873 896265 G3 1028.7 40503.8 4706.4 22829.9 46112.9 2269.28 2749.41 872.593 G4 250475 305033 108578 207857 355691 51608.3 26328.8 295479 G5 10376.6 1.80608e+06 415144 1.18351e+06 1.95614e+06 184716 106398 7215.65 G5A 31415.5 299984 21012.8 185618 311613 15580.3 9626.33 41095 G6 855884 4.46124e+06 1.27903e+06 2.82022e+06 5.35878e+06 587856 267044 698597 G7 617.88 31119 3714.75 16681.8 36527.6 1580.46 1225.58 620.146 GAGAAn_TTCTCn_randomDistribution 47995.7 37174.7 10852.6 31668.6 96826 0 0 74963.9 GATE 3.10209e+06 7.62425e+06 2.13449e+06 5.21017e+06 1.00376e+07 862488 465060 2.62676e+06 G-element 404749 9.33434e+06 5.41787e+06 5.48304e+06 9.04807e+06 1.87884e+06 998152 402220 gtwin 5677.6 562370 96572.6 319239 614922 49724.1 25978 6218.43 gypsy 55692.8 846042 236217 502176 902707 88384 48822.6 89880.8 gypsy10_new 3269.58 503421 277601 316205 544869 122867 60903.4 2549.7 gypsy11 557.291 5373.04 274.545 2811.01 4270.58 483.635 209.304 509.383 gypsy12 5.47563e+06 4.19867e+06 1.22074e+06 2.86381e+06 5.74699e+06 629519 316125 5.26041e+06 gypsy2_new 12038.7 656038 82816 385289 694564 47792.6 29556.7 11763.5 gypsy3_new 28470.6 407880 194461 259964 442323 107706 52954 23676.2 gypsy4 83146.5 1.27424e+06 302241 776370 1.31106e+06 154399 79023.6 60776.2 gypsy5 356.427 33297.5 1259.37 21826.6 30166.7 731.81 572.281 371.472 gypsy6_new 51218.4 1.5094e+06 433928 866240 1.68708e+06 210131 102765 44862.6 gypsy7_new 3762.08 249671 50998.3 141604 230572 26997.3 14746.9 2829.99 gypsy8 7974.24 87289.6 10769.2 52332.1 76588.2 8140.25 5135.76 5906.21 gypsy9_new 650.724 59574.2 7372.14 41651.9 56719.8 4765.94 2292.7 519.54 Helena 46165.7 1.46448e+06 106367 737558 1.56022e+06 39062.4 20682.2 25707.6 Helitron 221.261 2579.19 314.041 1007.93 1891.82 171.295 55.7037 226.846 HeT-A 5.78771e+06 2.10549e+07 3.5586e+06 1.24195e+07 2.35219e+07 1.23854e+06 661433 5.92248e+06 HMS-Beagle 1.82469e+06 2.25036e+06 7.7933e+06 1.29683e+06 2.45874e+06 3.36363e+06 1.48648e+06 912797 HMS-Beagle2 432272 940616 177653 582676 1.01001e+06 81302.3 40097.2 470790 hobo 526708 3.57385e+06 3.83498e+06 2.66029e+06 3.74085e+06 1.62167e+06 820534 422183 hopper 222211 9.26297e+06 1.06874e+06 5.92083e+06 9.64432e+06 486262 225654 142398 hopper2 356739 2.50834e+07 1.32847e+06 1.82741e+07 3.35869e+07 367662 272862 169609 Idefix 87116 651284 327522 363371 623483 166999 81451.2 38313.5 I-element_new 748205 2.7887e+06 3.15581e+06 1.71156e+06 2.84682e+06 1.28986e+06 586509 509231 INE-1 885397 863777 357902 491927 998768 362514 100987 418167 invader1 5.3009e+06 1.88689e+07 6.47764e+06 1.37228e+07 2.51949e+07 2.38735e+06 1.5095e+06 4.96273e+06 invader2 552101 1.95314e+07 8.04272e+06 1.21261e+07 3.03835e+07 3.68899e+06 1.52061e+06 361999 invader3 9950.18 5.15252e+06 3.81068e+06 2.64693e+06 5.52928e+06 1.61492e+06 811420 6578.15 invader4 418278 4.05416e+06 572414 2.13267e+06 4.8522e+06 283433 138811 144463 invader5 151.794 2389.61 243.241 2108.77 2163.24 139.565 167.277 139.645 invader6 987539 821996 187982 477030 887007 83343.5 46189.6 434650 Ivk 134615 1.91476e+06 766440 1.14266e+06 2.02752e+06 273208 145313 97233.3 jockey 2.37194e+06 1.68233e+06 519699 1.03009e+06 1.98059e+06 223510 93712.5 1.06776e+06 jockey2 8090.15 528921 309611 321969 769354 121609 56638.4 10761.3 Juan 1.07155e+06 710344 96922.3 426868 693451 43911.1 21359.9 565059 looper1 107632 150356 25141.3 93171.1 152917 13028.6 8000.37 92327.4 mariner2 1208.69 12175.4 829.806 6389.07 7139.48 388.42 447.829 1366.49 Max-element 4.3187e+06 4.71073e+06 876121 2.8997e+06 5.1676e+06 361834 198452 3.43452e+06 McClintock 125703 930769 246463 527599 971696 108516 60488.5 109437 mdg1 58666.4 745018 112703 441647 812106 67399.2 33235.6 35643 mdg3 889528 2.688e+06 90937.5 1.68032e+06 3.07639e+06 46195.9 30036.5 577306 micropia 113270 9.63664e+06 5.71301e+06 5.71792e+06 1.53257e+07 1.9469e+06 892732 103901 NOF 158764 41097 2398.41 27639.5 44184.7 2166.9 1431 120399 NTS_DM_randomDistribution 23622.7 29766.7 7379.97 30792.2 33102.4 6038.16 4058.02 21027.3 opus 974852 2.27672e+06 465317 1.36806e+06 2.76958e+06 198633 101358 384886 Osvaldo 4219.81 94337.8 16926.2 51018.4 83242.8 11364.1 7126.32 3534.72 P-element 70.7047 55.6 0 73.3322 77.3882 0 0 64.3869 Pifo_Dya_repbase 153.151 20722 631.109 10694.2 18427 364.204 224.68 190.719 pogo 690455 2.89569e+06 505486 1.83716e+06 3.75784e+06 263216 139887 432913 Quasimodo 344814 2.02562e+06 438629 1.14436e+06 2.23325e+06 209118 98719.1 302467 R1-2 589.657 8548.86 1086.47 6518.15 7271.07 1351.83 424.949 772.814 R1A1-element 3.57057e+06 1.38736e+07 3.08559e+06 8.91868e+06 1.71842e+07 1.5858e+06 786945 4.8405e+06 R2-element 929.369 884404 109855 498942 906296 56371.8 30720.1 1293.35 Repbase_Bica 16370.7 724227 626323 437587 846153 324539 150336 12354.4 Repbase_Chimpo 542414 3.26945e+06 3.7446e+06 2.0397e+06 4.15945e+06 1.71771e+06 721549 424003 Repbase_Chouto 16634.3 484506 94299.9 284113 517553 46213.5 25163.8 11995.3 Repbase_DNAREP1 3.38553e+06 2.54269e+06 1.59462e+06 1.67704e+06 3.0861e+06 996114 387660 1.56958e+06 Repbase_FB4 61057 22633.6 3687.77 12312.4 19952.6 3520.41 2189.73 49864.9 Repbase_Rt1a 3.83714e+06 3.07293e+06 830524 1.82409e+06 3.42839e+06 447535 182867 2.56735e+06 Repbase_Rt1b 5.64626e+06 5.01196e+06 1.88756e+06 2.92905e+06 6.00389e+06 885547 445586 4.04736e+06 Repbase_Transib1 15674.2 67075.6 3186.7 46072 62773 3045.12 1542.7 13132.4 roo 9.27846e+06 3.90307e+06 2.08414e+06 2.70215e+06 4.71549e+06 720811 438340 6.73409e+06 rooA 459916 490029 147343 293656 509273 70808.9 37431.5 248854 rover 125566 1.32982e+06 869563 750396 1.2108e+06 378837 170635 119266 RSP_randomDistribution 787.981 16162.9 6004.05 9233.64 19500.8 3274.93 2662.45 401.572 Rt1c 31240 92992.5 4475.83 57494.6 84642.3 2372.52 1489.17 17180 S2 3824.05 17765.2 1457.05 20553.2 18445.7 714.603 479.855 3263.73 SAR2_DM_randomDistribution 139497 1.80377e+06 206581 1.01855e+06 2.51105e+06 93494.9 69326.3 75915.8 SAR_DM_randomDistribution 3.97083e+06 253061 10734.5 200137 347030 9034.47 6420.8 1.51711e+06 Satellite_260bp_1pt688_randomDistribution 3.73106e+06 2.64771e+06 468511 1.97101e+06 2.95064e+06 260749 73427.9 1.9517e+06 Satellite_353bp_1pt688_randomDistribution 89813.9 915746 100488 620675 1.23779e+06 52364.9 44410.9 43600 Satellite_356bp_1pt688_randomDistribution 2.48004e+07 5.28141e+06 941386 5.21619e+06 1.16385e+07 504915 354259 8.32041e+06 Satellite_359bp_1pt688_randomDistribution 0 0 0 0 0 0 0 0 Satellite_LRsp_randomDistribution 173898 8.18847e+06 1.10602e+06 5.1044e+06 8.83956e+06 514146 333398 70261.3 Satellite_RRsp_randomDistribution 164192 564459 78169.2 316020 423895 50644.9 37324.4 53217.6 S-element 904077 1.70466e+06 358835 1.26461e+06 2.00543e+06 159385 88423.4 683854 small_kipf_region_randomDistribution 63.858 106.117 104.394 71.9239 90.7308 74.0007 54.1448 57.1659 some_gene_Ebx_randomDistribution 0 0 0 0 0 0 0 0 some_heterochromatin_region_randomDistribution 5.13696e+06 1.93141e+06 754504 1.34502e+06 2.73744e+06 303901 176737 3.81599e+06 springer 329372 1.487e+06 341696 876462 1.71561e+06 160864 76812.4 259259 Stalker 1.04569e+06 953641 296938 623644 989934 137107 80516.6 741475 Stalker2 71470.2 236501 95397.5 144353 260137 33641.2 16543.8 65546.7 Tabor 3027.38 73324 7226.61 41040.7 57877.7 4540.06 2641.24 1501.89 TAHRE 787402 6.99069e+06 285436 4.29097e+06 7.69103e+06 115364 72173.6 814269 TART-A 504992 2.69989e+06 169828 1.48911e+06 2.73055e+06 95794.9 39999 632456 TAS_2L_randomDistribution 3.92824e+07 1.31572e+06 185031 987965 1.71125e+06 46489 38947.4 4.15834e+07 TAS_2R_randomDistribution 6.22669e+06 2.21904e+06 54875.4 1.21752e+06 2.81129e+06 21850.6 18743.3 4.77329e+06 TAS_3L_randomDistribution 8.99308e+06 373045 1828.07 289777 610184 1218.71 756.6 186586 TAS_X_randomDistribution 327358 1.43751e+06 51640.8 956607 1.66755e+06 23497 13522.1 355564 Tc1 1502.5 38185.6 1092.14 20714.8 39109.9 1507.73 622.304 1171.84 Tc1-2 121145 616177 321222 404929 707921 106189 67649.5 120517 Tc3 413.43 1344.59 318.71 720.237 929.298 304.853 162.222 415.948 Tirant 3917.78 98202.5 160627 85152.9 132414 67990.5 36062.7 2427.37 tirantS_Dsi_Lerat 575.916 27479.6 61169.9 9855.37 19566.2 39896.7 8624.14 467.283 transib2 257190 1.04332e+06 151642 551618 1.13562e+06 64157.9 37840.6 150329 transib3 580.107 40589.5 2102.78 24610.6 38757.6 1692.28 1046.14 486.511 transib4 237.687 1399.65 197.028 940.853 733.274 339.495 106.458 239.068 Transib5 2770.58 160164 29488.6 110610 189569 16053.5 14321.3 2122.16 Transpac 92092.3 437578 189813 257300 492473 101868 51006.8 56757.9 XDMR_randomDistribution 1.89258e+06 41190.8 3256.04 21980.4 47076.7 1873.34 2175.69 432613 X-element 1.4923e+06 3.42591e+06 774955 2.05796e+06 4.03237e+06 331448 161290 1.27094e+06 ZAM 994.13 113899 3100.09 66439.6 106329 2361.34 1771.04 851.647